Skip to main content

Table 1 Characteristics of the reads from 15 small RNA libraries for chicken adipocytes

From: Integrative analysis of miRNA and mRNA profiles reveals that gga-miR-106-5p inhibits adipogenesis by targeting the KLF15 gene in chickens

Samples

Raw reads

Clean reads

GC, %

Q30, %

Unannotated reads

Mapped reads

Mapped ratio

A0–1

14,095,191

13,017,869

43.14

96.53

12,601,329

9,529,509

75.62%

A0–2

11,381,923

10,398,538

42.86

96.88

10,064,002

7,333,515

72.87%

A0–3

13,113,101

12,328,709

42.94

96.03

12,066,750

8,614,258

71.39%

A12–1

13,126,885

11,684,725

43.39

95.27

11,383,525

8,067,627

70.87%

A12–2

13,372,605

11,924,653

42.83

96.82

11,504,002

8,334,451

72.45%

A12–3

12,196,057

11,130,917

43.23

96.79

10,833,452

7,786,407

71.87%

A48–1

12,307,962

11,014,663

43.17

96.72

10,693,130

8,124,260

75.98%

A48–2

11,451,914

10,521,608

42.76

97.26

10,257,682

8,145,917

79.41%

A48–3

12,558,151

11,540,836

42.71

97.34

11,312,093

8,984,793

79.43%

A72–1

13,710,206

12,176,651

43.20

96.41

11,697,516

9,159,639

78.3%

A72–2

12,275,200

11,242,346

43.22

97.14

10,892,833

8,315,058

76.34%

A72–3

11,995,065

10,904,132

43.14

96.76

10,478,474

8,209,934

78.35%

A120–1

19,750,485

15,852,219

44.07

95.23

15,042,721

11,195,181

74.42%

A120–2

28,052,802

25,199,083

43.04

96.18

24,332,421

18,508,850

76.07%

A120–3

13,530,281

11,270,025

43.62

95.17

10,835,595

8,284,130

76.45%